Faculty Publications

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Evolution of LiverNet 2.x: Architectures for automated liver cancer grade classification from H&E stained liver histopathological images
(Springer, 2024) Chanchal, A.K.; Lal, S.; Barnwal, D.; Sinha, P.; Arvavasu, S.; Kini, J.
Recently, the automation of disease identification has been quite popular in the field of medical diagnosis. The rise of Convolutional Neural Networks (CNNs) for training and generalizing medical image data has proven to be quite efficient in detecting and identifying the types and sub-types of various diseases. Since the classification of large datasets of Hematoxylin & Eosin (H&E) stained histopathology images by experts can be expensive and time-consuming, automated processes using deep learning have been encouraged for the past decade. This paper introduces LiverNet 2.x model by modifying the previously encountered LiverNet architecture. The proposed model uses two different improvements of the Atrous Spatial Pyramid Pooling (ASPP) block to extract the clinically defined features of hepatocellular carcinoma (HCC) from liver histopathology images. LiverNet 2.0 uses a modified form of ASPP block known as DenseASPP, where all the atrous convolution outputs are densely connected. Whereas LiverNet 2.1 uses fewer concatenations while maintaining a large receptive field by stacking the dilated convolutional blocks in a tree-like fashion. This paper also discusses the trade-off between LiverNet 2.0 and LiverNet 2.1 in terms of accuracy and computational complexity. All comparison model and the proposed model is trained and tested on the patches of two different histopathological datasets. The experimental results show that the proposed model performs better compared to reference models. For the KMC Liver dataset, LiverNet 2.0 and LiverNet 2.1 achieved an accuracy of 97.50% and 97.14% respectively. Accuracy of 94.37% and 97.14% for the TCGA Liver dataset are achieved. © 2023, The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.
FPGA implementation of deep learning architecture for kidney cancer detection from histopathological images
(Springer, 2024) Lal, S.; Chanchal, A.K.; Kini, J.; Upadhyay, G.K.
Kidney cancer is the most common type of cancer, and designing an automated system to accurately classify the cancer grade is of paramount importance for a better prognosis of the disease from histopathological kidney cancer images. Application of deep learning neural networks (DLNNs) for histopathological image classification is thriving and implementation of these networks on edge devices has been gaining the ground correspondingly due to high computational power and low latency requirements. This paper designs an automated system that classifies histopathological kidney cancer images. For experimentation, we have collected Kidney histopathological images of Non-cancerous, cancerous, and their respective grade of Renal Cell Carcinoma (RCC) from Kasturba Medical College (KMC), Mangalore, Karnataka, India. We have implemented and analyzed performances of deep learning architectures on a Field Programmable Gate Array (FPGA) board. Results yield that the Inception-V3 network provides better accuracy for kidney cancer detection as compared to other deep learning models on Kidney histopathological images. Further, the DenseNet-169 network provides better accuracy for kidney cancer grading as compared to other existing deep learning architecture on the FPGA board. © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2023.
Classification and grade prediction of kidney cancer histological images using deep learning
(Springer, 2024) Chanchal, A.K.; N, S.; Lal, S.; Kumar, S.; Saxena, P.U.P.
Renal Cell Carcinoma (RCC) is the most common malignant tumor (85%) of kidney cancer and has a complex histological pattern and nuclear structure. The manual diagnosis of kidney cancer or any other cancer from histopathology image depends on the knowledge and experience of pathologists, and the pathologist’s experience influences the results. According to studies, the kind of histology in kidney cancer is related to the prognosis and course of treatment. Since the kind of histology, molecular profile, and stage of the disease all affect how the disease is treated, there is an essential need to develop an automated system that can precisely analyze the histopathological images of the disease. This work demonstrates how a deep learning framework can be used to predict and classify associated grades of RCC from provided haematoxylin and eosin (H &E) images. The proposed model focuses on two important tasks- First to capture and extract associated features from the H &E images of five different grades. Second, to classify the new set of unseen H &E images into five separate grades using the obtained features. The proposed architecture has been tested and experimented on two independent datasets containing H &E stained histopathology images. The proposed architecture has been examined using the following performance metrics namely precision, recall, F1 - score, accuracy, Floating-point operations (FLOPs), and the total number of parameters. The obtained results show that the proposed architecture attains better results over seven state-of-the-art deep learning architectures on two different H &E stained histopathology image datasets. © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2024.

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